Package: crew.cluster 0.3.7

William Michael Landau

crew.cluster: Crew Launcher Plugins for Traditional High-Performance Computing Clusters

In computationally demanding analysis projects, statisticians and data scientists asynchronously deploy long-running tasks to distributed systems, ranging from traditional clusters to cloud services. The 'crew.cluster' package extends the 'mirai'-powered 'crew' package with worker launcher plugins for traditional high-performance computing systems. Inspiration also comes from packages 'mirai' by Gao (2023) <https://github.com/r-lib/mirai>, 'future' by Bengtsson (2021) <doi:10.32614/RJ-2021-048>, 'rrq' by FitzJohn and Ashton (2023) <https://github.com/mrc-ide/rrq>, 'clustermq' by Schubert (2019) <doi:10.1093/bioinformatics/btz284>), and 'batchtools' by Lang, Bischl, and Surmann (2017). <doi:10.21105/joss.00135>.

Authors:William Michael Landau [aut, cre], Michael Gilbert Levin [aut], Brendan Furneaux [aut], Eli Lilly and Company [cph, fnd]

crew.cluster_0.3.7.tar.gz
crew.cluster_0.3.7.zip(r-4.6)crew.cluster_0.3.7.zip(r-4.5)crew.cluster_0.3.7.zip(r-4.4)
crew.cluster_0.3.7.tgz(r-4.5-any)crew.cluster_0.3.7.tgz(r-4.4-any)
crew.cluster_0.3.7.tar.gz(r-4.6-noble)crew.cluster_0.3.7.tar.gz(r-4.5-noble)
crew.cluster_0.3.7.tgz(r-4.4-emscripten)crew.cluster_0.3.7.tgz(r-4.3-emscripten)
crew.cluster.pdf |crew.cluster.html✨
crew.cluster/json (API)
NEWS

# Install 'crew.cluster' in R:
install.packages('crew.cluster', repos = c('https://community.r-multiverse.org', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wlandau/crew.cluster/issues

Pkgdown site:https://wlandau.github.io

On CRAN:

Conda:

crewhigh-performance-computing

6.88 score 29 stars 72 scripts 753 downloads 25 exports 27 dependencies

Last updated 18 days agofrom:0999b6ebda (on 0.3.7). Checks:10 OK. Indexed: no.

TargetResultTotal time
linux-develOK
source / vignettesOK
linux-releaseOK
macos-release-arm64OK
macos-oldrel-arm64OK
windows-develOK
windows-releaseOK
windows-oldrelOK
wasm-releaseOK
wasm-oldrelOK

Exports:crew_class_launcher_clustercrew_class_launcher_lsfcrew_class_launcher_pbscrew_class_launcher_sgecrew_class_launcher_slurmcrew_class_monitor_clustercrew_class_monitor_sgecrew_class_monitor_slurmcrew_controller_lsfcrew_controller_pbscrew_controller_sgecrew_controller_slurmcrew_launcher_clustercrew_launcher_lsfcrew_launcher_pbscrew_launcher_sgecrew_launcher_slurmcrew_monitor_clustercrew_monitor_sgecrew_monitor_slurmcrew_options_clustercrew_options_lsfcrew_options_pbscrew_options_sgecrew_options_slurm

Dependencies:clicrewdata.tablefansifastmapgetipgluelaterlifecyclemagrittrmirainanonextpillarpkgconfigprocessxpromisespsR6Rcpprlangtibbletidyselectutf8vctrswithrxml2yaml