Package: bedrockbio 1.2.1

Liam Abbott

bedrockbio: Open-Access Computational Biology Datasets

Efficiently access the 'Bedrock Bio' library of open-access computational biology datasets. Lazily query datasets backed by 'DuckDB' and 'Apache Iceberg', with support for predicate pushdown and column projection to the cloud storage backend. This enables quick, iterative access to otherwise massive, unwieldy datasets without downloading them in full. See <https://bedrock.bio> for available datasets and documentation.

Authors:Liam Abbott [aut, cre, cph]

bedrockbio_1.2.1.tar.gz
bedrockbio_1.1.0.zip(r-4.6)bedrockbio_1.1.0.zip(r-4.5)
bedrockbio_1.2.1.tgz(r-4.6-any)bedrockbio_1.2.1.tgz(r-4.5-any)
bedrockbio_1.2.1.tar.gz(r-4.6-any)bedrockbio_1.2.1.tar.gz(r-4.5-any)
bedrockbio_1.2.1.tgz(r-4.5-emscripten)
bedrockbio.pdf |bedrockbio.html✨
bedrockbio/json (API)
NEWS

# Install 'bedrockbio' in R:
install.packages('bedrockbio', repos = c('https://community.r-multiverse.org', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bedrock-bio/bedrock-bio-client/issues

On CRAN:

Conda:

2.18 score 1 stars 8 scripts 3 exports 26 dependencies

Last updated from:9c41f9e3b0 (on v1.2.1). Checks:8 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK116
source / vignettesOK196
linux-release-x86_64OK136
macos-devel-arm64OK100
macos-release-arm64OK75
windows-develOK73
windows-releaseOK62
wasm-releaseOK121

Exports:describe_datasetlist_datasetsload_dataset

Dependencies:blobclicpp11curlDBIdbplyrdplyrduckdbgenericsgluejsonlitelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr