--- title: "Docker" output: rmarkdown::html_vignette vignette: > %\VignetteIndexEntry{Docker} %\VignetteEngine{knitr::rmarkdown} %\VignetteEncoding{UTF-8} --- Using `httpgd` to display R plots in a Docker container (Linux container) may be easier than the traditional and common method; linking the X11 window system. ## Basic usage ### Build a docker image See the `vignette("a00_installation")` for details on how to install `httpgd` on Linux. You can create a Docker image with `httpgd` installed by create a Dockerfile like below. ```Dockerfile FROM r-base:latest # Install httpgd and dependent packages. RUN apt-get update \ && apt-get install -y --no-install-recommends \ libfontconfig1-dev \ && apt-get autoremove -y && apt-get clean -y && rm -rf /var/lib/apt/lists/* \ && install2.r --error --skipinstalled --ncpu -1 \ httpgd \ && rm -rf /tmp/downloaded_packages ``` Run the `docker build` command from your shell to build a Docker image. ```sh docker build . -f Dockerfile -t httpgd:test ``` ### Create a container When creating a container with the `docker run` command, bind the port to be used by `httpgd` with the `-p` (`--publish`) option. If you run R in a container with a command like the following, the 8888 port of the container will be bound to the 8888 port of the Docker host. ```sh docker run --rm -it -p 8888:8888 httpgd:test R ``` ### Start httpgd server Running the following command in the R console will initialize the graphics device and start the server. ```R httpgd::hgd(host = "0.0.0.0", port = 8888) ``` Then, copy the displayed link in your browser. If you want to display the link again, execute the `hgd_url()` function as follows. The hostname can be replaced with any value (e.g. localhost). ```R httpgd::hgd_url(host = "localhost") ``` ## Advanced usage ### Set options in Rprofile By setting options `httpgd.host` and `httpgd.port` in the Rprofile, you can omit setting the arguments when starting the httpgd server by `hgd()`. For example, if you create a Dockerfile with the following contents, you can build an image with these options already set in the Rprofile. ```Dockerfile FROM r-base:latest # Install httpgd and dependent packages. RUN apt-get update \ && apt-get install -y --no-install-recommends \ libfontconfig1-dev \ && apt-get autoremove -y && apt-get clean -y && rm -rf /var/lib/apt/lists/* \ && install2.r --error --skipinstalled --ncpu -1 \ httpgd \ && rm -rf /tmp/downloaded_packages # Set default values used in the httpgd::hgd() function. RUN echo 'options(httpgd.host = "0.0.0.0", httpgd.port = 8888)' >> /etc/R/Rprofile.site EXPOSE 8888 ```